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Analyzed about 1 year ago. based on code collected about 1 year ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Jan 18, 2023 — Jan 18, 2024 Showing page 96 of 100 Search / Filter on:
add script to submit sequences to genbank gss division	tanghaibao as Haibao Tang	More...				almost 14 years ago
add matrix subroutine to determine orientations based on pairwise orientations	tanghaibao as Haibao Tang	More...				almost 14 years ago
implement agp reindex	tanghaibao as Haibao Tang	More...				almost 14 years ago
get coverage for coords file parsing. agp build offers option to not validate input file.	tanghaibao as Haibao Tang	More...				almost 14 years ago
Merge branch 'master' of git://github.com/tanghaibao/jcvi	tanghaibao as Haibao Tang	More...				almost 14 years ago
add more options for prepareCA.fastq and fastq.format	tanghaibao as Haibao Tang	More...				almost 14 years ago
add fasta join to build scaffolds with inserted N's	tanghaibao as Haibao Tang	More...				almost 14 years ago
added functionality to agp	tanghaibao as Haibao Tang	More...				almost 14 years ago
refactor duplicate code in dotplot/blastplot	tanghaibao as Haibao Tang	More...				almost 14 years ago
remove the lastz_to_blast with the release of lastz v1.02.40	tanghaibao as Haibao Tang	More...				almost 14 years ago
add Jukes-Cantor calculator	tanghaibao as Haibao Tang	More...				almost 14 years ago
Merge branch 'master' of git://github.com/tanghaibao/jcvi	tanghaibao as Haibao Tang	More...				almost 14 years ago
add kmer histogram plotter	tanghaibao as Haibao Tang	More...				almost 14 years ago
Merge branch 'master' of git://github.com/tanghaibao/jcvi	tanghaibao as Haibao Tang	More...				almost 14 years ago
histogram.py now accepts multiple histograms in one plot	tanghaibao as Haibao Tang	More...				almost 14 years ago
Merge branch 'master' of git://github.com/tanghaibao/jcvi	tanghaibao as Haibao Tang	More...				almost 14 years ago
fix multiline-field when the value is empty	tanghaibao as Haibao Tang	More...				almost 14 years ago
Merge branch 'master' of git://github.com/tanghaibao/jcvi	tanghaibao as Haibao Tang	More...				almost 14 years ago
add utgcns and tigStore command wrapper for debugging failed jobs	tanghaibao as Haibao Tang	More...				almost 14 years ago
add unitig command wrapper	tanghaibao as Haibao Tang	More...				almost 14 years ago
default histogram 50 bins; add option to clc trim to fasta	tanghaibao as Haibao Tang	More...				almost 14 years ago
minor modifications with '--grid' option	tanghaibao as Haibao Tang	More...				almost 14 years ago
add clc quality_trim wrapper	tanghaibao as Haibao Tang	More...				almost 14 years ago
add clr script	tanghaibao as Haibao Tang	More...				almost 14 years ago
add amos message parser (built on the AMOS pythonmodule)	tanghaibao as Haibao Tang	More...				almost 14 years ago
minor, change trim default length 104->103	tanghaibao as Haibao Tang	More...				almost 14 years ago
readme minor edits	tanghaibao as Haibao Tang	More...				almost 14 years ago
add descriptions in README; add 454 read conversion in prepareCA	tanghaibao as Haibao Tang	More...				almost 14 years ago
merge scaffold module into assembly module	tanghaibao as Haibao Tang	More...				almost 14 years ago
add conversion from fastq to CA frg	tanghaibao as Haibao Tang	More...				almost 14 years ago

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