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glbase
No analysis available
glbase is a flexible and multifunctional toolkit allowing the user to perform many common analyses on ChIP-seq, microarray and RNA-seq data
It's particularly useful for intersecting any data that can be expressed as a CSV file. Examples are RNA-seq microarray data, gene lists, Chip-seq location
Mostly written in language not available
Licenses:
mit
Maltcms
Analyzed 2 months ago
Maltcms - Modular Application Toolkit for Chromatography Mass-Spectrometry is a JAVA API for preprocessing, alignment, analysis and visualization of data stored in open file formats used in Proteomics and Metabolomics research.
Licenses:
eclipse, lgpl3
SGA - String Graph Assembler
S
Analyzed 26 days ago
SGA is a de novo genome assembler based on the concept of string graphs. The major goal of SGA is to be very memory efficient, which is achieved by using a compressed representation of DNA sequence reads.
BioRuby
B
Analyzed 27 days ago
BioRuby provides integrated environment for Bioinformatics (Biology + Information science).
Licenses:
gpl, Ruby_License
SeqWare
Analyzed 27 days ago
The open source SeqWare project is a portable software infrastructure designed to analyze massive genomics datasets produced by contemporary and emerging technologies, in particular Next Generation Sequencing (NGS) platforms. It consists of a comprehensive suite of infrastructure tools focused on
Madeline
Analyzed 26 days ago
The Madeline 2.0 Pedigree Drawing Engine is a pedigree drawing program designed to handle large and complex pedigrees with an emphasis on readability and aesthetics. Although the program takes inspiration from Madeline v. 0.935, the Madeline 2.0 Pedigree Drawing Engine, or just Madeline 2.0 for
Mobyle
M
No analysis available
Mobyle is a framework and web portal specifically aimed at the integration of bioinformatics software and databanks.
Mobyle enables the use of local and remote bioinformatics services, seamlessly integrated within a homogeneous and
web-accessible environment that focuses on usability. This
Mostly written in language not available
Licenses:
gpl
SequenceServer
S
Analyzed 26 days ago
A simple web front end to NCBI BLAST+ that lets users share, and consume sequence data intuitively.
"The iPod of Blast searching"
Set up your local BLAST server in minutes...
Licenses:
No declared licenses
MOLGENIS model-driven database platform
M
Analyzed 26 days ago
MOLGENIS can be used to generate databases for life science experiments (micrroarray, mass spectrometry, genomics) having a web user interface, csv exchange format, and programmatic interfaces (web services, rest, and r-project). See NatRevGen 8.
Licenses:
No declared licenses