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IntAct
I
Analyzed 26 days ago
IntAct is an open source package to store and manipulate molecular interaction data.
Licenses:
apache_2
RDKit
R
Analyzed 26 days ago
A collection of cheminformatics and machine-learning software written in C++ and Python.
Licenses:
BSD-3-Clause, gpl
Soaplab
S
Analyzed 26 days ago
Soaplab2 (or Soaplab) is a tool that can automatically generate and deploy Web Services on top of existing command-line analysis programs. It is especially well suited for applications with well described input and output parameters, such as EMBOSS (a package of Open Source software for sequence
Licenses:
apache_2
JaCuda
J
Analyzed 26 days ago
JaCuda is a small project which provides several mathematical function useful for a chemist or somebody working with mass specs.
These functions will be executed using a cuda compatible gpu or if none is available it will fall back to the c++ implementation. If this is also not possible we will
ProDy
Analyzed 11 months ago
ProDy is a free and open-source Python package for analysis and modeling of protein structural dynamics. It allows for efficient analysis of large datasets and is suitable for development or prototyping of structure-based analysis and modeling software.
Madeline
Analyzed 26 days ago
The Madeline 2.0 Pedigree Drawing Engine is a pedigree drawing program designed to handle large and complex pedigrees with an emphasis on readability and aesthetics. Although the program takes inspiration from Madeline v. 0.935, the Madeline 2.0 Pedigree Drawing Engine, or just Madeline 2.0 for
SeqWare
Analyzed 27 days ago
The open source SeqWare project is a portable software infrastructure designed to analyze massive genomics datasets produced by contemporary and emerging technologies, in particular Next Generation Sequencing (NGS) platforms. It consists of a comprehensive suite of infrastructure tools focused on
glbase
No analysis available
glbase is a flexible and multifunctional toolkit allowing the user to perform many common analyses on ChIP-seq, microarray and RNA-seq data
It's particularly useful for intersecting any data that can be expressed as a CSV file. Examples are RNA-seq microarray data, gene lists, Chip-seq location
Mostly written in language not available
Licenses:
mit
MOLGENIS model-driven database platform
M
Analyzed 26 days ago
MOLGENIS can be used to generate databases for life science experiments (micrroarray, mass spectrometry, genomics) having a web user interface, csv exchange format, and programmatic interfaces (web services, rest, and r-project). See NatRevGen 8.
Licenses:
No declared licenses