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Analyzed about 1 year ago. based on code collected about 1 year ago.
Jan 18, 2023 — Jan 18, 2024
Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
[CI] Also compile in the current folder
tanghaibao
as Haibao Tang
More... over 7 years ago
[formats] Add cblast.pyx for 50% speedup of BlastLine parsing
tanghaibao
as Haibao Tang
More... over 7 years ago
[projects] Add pistachio.py
tanghaibao
as Haibao Tang
More... over 7 years ago
[utils] aws.start() --ondemand now functional
tanghaibao
as Haibao Tang
More... over 7 years ago
[utils] Add --ondemand for aws.start() [incomplete]
tanghaibao
as Haibao Tang
More... over 7 years ago
[formats] Remove --phytozome in gff
tanghaibao
as Haibao Tang
More... over 7 years ago
[formats] Fix relating to discussion in #75
vivekkrish
as Vivek Krishnakumar
More... over 7 years ago
[formats] fix attribute setting logic in gff.format()
vivekkrish
as Vivek Krishnakumar
More... over 7 years ago
[formats] Add gtf file detection for gz files (may be related to issue #75)
tanghaibao
as Haibao Tang
More... over 7 years ago
[formats] Add base.mergecsv()
tanghaibao
as Haibao Tang
More... over 7 years ago
[variation] Add tmpdir in cnv
tanghaibao
as Haibao Tang
More... over 7 years ago
[variation] Separate avgcn and medcn writing tsv output
tanghaibao
as Haibao Tang
More... over 7 years ago
[variation] Switch back to gencode.v26 from v27
tanghaibao
as Haibao Tang
More... over 7 years ago
[variation] Add cnv.exonunion()
tanghaibao
as Haibao Tang
More... over 7 years ago
[variation] Tabulate gcn
tanghaibao
as Haibao Tang
More... over 7 years ago
[variation] Add cnv.gcn()
tanghaibao
as Haibao Tang
More... over 7 years ago
[CI] Add tests.py
tanghaibao
as Haibao Tang
More... over 7 years ago
[projects] Minimize italic fonts in str.tredparse()
tanghaibao
as Haibao Tang
More... over 7 years ago
[assembly] Add plotratio() in allmaps (per issue #71)
tanghaibao
as Haibao Tang
More... over 7 years ago
Merge pull request #72 from tanghaibao/jcvi-module-docs
tanghaibao
as Haibao Tang
More... over 7 years ago
+ Add one-line descriptions for each `jcvi` module + Docstring is used to show help text when invoking `python -m jcvi`
vivekkrish
as Vivek Krishnakumar
More... over 7 years ago
Merge pull request #69 from zengxiaofei/master
tanghaibao
as Haibao Tang
More... over 7 years ago
Update synteny.py
Xiaofei Zeng
More... over 7 years ago
Update synteny.py
Xiaofei Zeng
More... over 7 years ago
raise error while no anchor found
zengxiaofei
More... over 7 years ago
Merge pull request #68 from zengxiaofei/master
tanghaibao
as Haibao Tang
More... over 7 years ago
add argument --dbtype for LAST
zengxiaofei
More... over 7 years ago
[assembly] Use fps instead of delay in allmaps
tanghaibao
as Haibao Tang
More... over 7 years ago
[assembly] Add --engine to allow movie to generate MP4 or GIF
tanghaibao
as Haibao Tang
More... over 7 years ago
[graphics] Lazy import KsFile in dotplot
tanghaibao
as Haibao Tang
More... over 7 years ago