| [assembly] Add --cx in kmer.kmc() |
|
More...
|
almost 7 years ago
|
| [assembly] Add --fasta in kmc() |
|
More...
|
almost 7 years ago
|
| [formats] Add fasta.simulate() |
|
More...
|
almost 7 years ago
|
| [formats] + Update fastq-dump to use `--split-files` instead of legacy `--split-3` parameter |
|
More...
|
almost 7 years ago
|
| [apps] + Use formats.fastq.fromsra() to convert from SRA -> FASTQ |
|
More...
|
almost 7 years ago
|
| [apps] Update apps.fetch.sra() to dump gzipped FASTQ by default |
|
More...
|
almost 7 years ago
|
| [projects] Modify css in age.trait() |
|
More...
|
almost 7 years ago
|
| [projects] Add rounded corners for box |
|
More...
|
almost 7 years ago
|
| [projects] Add age.traits() |
|
More...
|
almost 7 years ago
|
| Merge pull request #87 from zengxiaofei/master |
|
More...
|
about 7 years ago
|
| [CI] Restrict testing to top-level ./tests directory Add missing `PyYAML` dependency to requirements.txt and setup.py |
|
More...
|
about 7 years ago
|
| [CI] Add test framework (using py.tests) Add sample tests for formats.gff() actions |
|
More...
|
about 7 years ago
|
| Merge branch 'master' of https://github.com/zengxiaofei/jcvi |
|
More...
|
about 7 years ago
|
| add option: --no_strip_names for ortholog (compara/catalog.py) |
|
More...
|
about 7 years ago
|
| Merge pull request #1 from tanghaibao/master |
|
More...
|
about 7 years ago
|
| [projects] Add projects.age |
|
More...
|
about 7 years ago
|
| [utils] Update instance.json |
|
More...
|
about 7 years ago
|
| [annotation] Update AHRD configuration template |
|
More...
|
about 7 years ago
|
| [annotation] Update ahrd yml config to include protein DB path [apps] Fix incorrect param value passed to GridProcess() in array jobs [assembly] Optionally allow bedpe format file to include strand info [formats] Re-instate BedLine.reverse_complement() method [formats] Minor bug fix in parsing of GenBank to GFF format [formats] Other minor non-breaking fixes |
|
More...
|
about 7 years ago
|
| Merge branch 'master' of github.com:tanghaibao/jcvi |
|
More...
|
about 7 years ago
|
| [assembly] Fix kmer.multihistogram() |
|
More...
|
about 7 years ago
|
| [graphics] Handle cases where more species than palette (#80) |
|
More...
|
about 7 years ago
|
| [CI] Include setup_helper.py in MANIFEST.in |
|
More...
|
over 7 years ago
|
| [CI] Cleanup setup.py |
|
More...
|
over 7 years ago
|
| [CI] Rename setup_helpers.py to setup_helper.py |
|
More...
|
over 7 years ago
|
| [CI] Add setup_helpers.py |
|
More...
|
over 7 years ago
|
| [formats] Remove typedef in cblast |
|
More...
|
over 7 years ago
|
| [formats] Remove PY_NEW in cblast |
|
More...
|
over 7 years ago
|
| [formats] Fix query and subject setter in cblast |
|
More...
|
over 7 years ago
|
| [utils] Check instance_id in aws.start() and stop() |
|
More...
|
over 7 years ago
|
