Fix py2=>py3: fp.next() converted to next(fp) (thanks @agroppi, #363) (#364) |
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almost 4 years ago
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Check if parent is None before adding to set |
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almost 4 years ago
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Add option --primary_only to retain only the primary transcripts for synteny (#360) |
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almost 4 years ago
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Add --prefix to bed.format() (#357) |
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almost 4 years ago
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Allow glyphcolor to be specified according to a palette (#351) |
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about 4 years ago
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Confirm py36 runs (#349) |
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about 4 years ago
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Use more-itertools library instead of utils.iter (#348) |
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about 4 years ago
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Use OR-Tools for TSP (#345) |
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about 4 years ago
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Add OR-tools when running quota filtering (#54) (#344) |
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about 4 years ago
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[utils] Add console.py to create a single rich Console (#343) |
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about 4 years ago
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[utils] Simplify ez_setup.py (#342) |
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about 4 years ago
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[utils] Remove webcolors implementation; add tests (#341) |
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about 4 years ago
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Add `rich` as a dependency to beautify console text output (#340) |
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about 4 years ago
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Suppress test warnings (#338) |
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about 4 years ago
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[graphics] Allow comments in seqids; validate seqid size (thanks @chaimol, #335) (#336) |
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about 4 years ago
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[setup] Add tests_require (#330) |
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about 4 years ago
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Fix bandit errors (#326) |
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about 4 years ago
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[tests] Test python with 3.9 (#325) |
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about 4 years ago
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[projects] Additional changes with simulations (#324) |
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about 4 years ago
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[projects] Add scripts from past projects (#322) |
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about 4 years ago
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[graphics] Disable logging pollution from PIL and UserWarning on FixedLocator (#319) |
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about 4 years ago
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[assembly] Add option --sep in geneticmap.bed() (#318) |
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about 4 years ago
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Create ossar-analysis.yml |
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about 4 years ago
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[graphics] Allow column 3 to specify colors (#312, thanks @scotty323) (#314) |
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about 4 years ago
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type1ec.sty required for LaTeX, add cm-super font package to container build (#313) |
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over 4 years ago
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Set "success" flag to True in base.py if file exists to avoid shredding (#311) |
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over 4 years ago
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Fix curl download bug per #307 (thanks @goertzenlr) (#310) |
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over 4 years ago
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[apps] Improvement of fetch.phytozome() per #307 (#309) |
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over 4 years ago
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[docker] Install curl in docker; add warnings in get_cookies() per #307 (#308) |
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over 4 years ago
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Set ubuntu base to be non-interactive during build (#306) |
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over 4 years ago
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