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Analyzed 12 months ago. based on code collected 12 months ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Jan 18, 2023 — Jan 18, 2024 Showing page 22 of 24 Search / Filter on:
change the meaning of l_shared (in line with GATK)	Heng Li	More...				over 12 years ago
minor change to the index description	Heng Li	More...				over 12 years ago
format of the new index	Heng Li	More...				over 12 years ago
added GT encoding	Heng Li	More...				over 12 years ago
updated BCFv2 spec	Heng Li	More...				over 12 years ago
cleanup	Heng Li	More...				over 12 years ago
clarified quick reference	Heng Li	More...				over 12 years ago
updated the quick reference	Heng Li	More...				over 12 years ago
bcf->vcf, up to INFO	Heng Li	More...				over 12 years ago
VCF=>BCF, up to QUAL	Heng Li	More...				over 12 years ago
code backup	Heng Li	More...				over 12 years ago
BCFv2 quick reference	Heng Li	More...				over 12 years ago
Merge pull request #1 from peterjc/annotations	Heng Li	More...				almost 13 years ago
Describe BAI changes for 'samtools idxstats' and details of BIN value	peterjc	More...				almost 13 years ago
Dummy annotations reads and CT/PT tags (discussed Oct/Nov 2011)	peterjc	More...				almost 13 years ago
Adjust LaTeX item labelling to compile on my machine	peterjc	More...				almost 13 years ago
patches by Peter Cock	Heng Li	More...				about 13 years ago
Clarification of PT/RT, by Peter Cock	Heng Li	More...				about 13 years ago
fixed the buggy example; minor clarification	Heng Li	More...				over 13 years ago
updated the padded SAM example	Heng Li	More...				over 13 years ago
added tags for read annotations and updated the padded SAM example	Heng Li	More...				over 13 years ago
clarify M5; updated max chromosome length from 2^29-1 to 2^31-1	Heng Li	More...				over 13 years ago
Guide for storing padded alignments	Heng Li	More...				over 13 years ago
* Added the "BC" tag - barcode sequence * Change "fragment" to "segment"	Heng Li	More...				over 13 years ago
Changed type of FZ tag from H to B,S Increased version #	On behalf of Alec Wysoker	More...				over 13 years ago
fixed an error raised by Ashish Agarwal	Heng Li	More...				over 13 years ago
updated revision number	Heng Li	More...				over 13 years ago
Clarify that QNAME can be "*" which means the information is not available.	Heng Li	More...				over 13 years ago
clarify that using identical QNAME is allowed, though discouraged.	Heng Li	More...				over 13 years ago
minor changes suggested by James Bonfield	Heng Li	More...				over 13 years ago

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