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Commits : Listings

Analyzed 12 months ago. based on code collected 12 months ago.
Jan 18, 2023 — Jan 18, 2024
Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
Add CIGAR =/X entry to version history appendix (PR #743) More... about 1 year ago
Revert inadvertent file mode change [trivial] More... about 1 year ago
Update CRAM, SAM, and VCF PDFs More... over 1 year ago
Refget version 2.0.0 bump (#479) More... over 1 year ago
#707 Clarified in change log that DPADJ, CNADJ and CICNADJ have been removed, not deprecated as their meaning was never unambiguous More... over 1 year ago
Replaced deprecated DPADJ/CNADJ fields in example More... over 1 year ago
Fix spurious errors in SAM test files More... over 1 year ago
Clarify that `@RG PI` values are integers More... over 1 year ago
Add CRAMcodecs.pdf to index.md More... almost 2 years ago
Add formatted CRAMcodecs.pdf and update CRAMv3.pdf More... almost 2 years ago
Our GitHub Action should ignore diff/*.pdf errors More... almost 2 years ago
Add a small introduction to CRAM pseudocode More... almost 2 years ago
Rewrite the CRAM Base Substitution (BS) code explanation More... almost 2 years ago
Spell out slice md5sums interaction with embedded references More... almost 2 years ago
Set safe.directory within the container-based GH Action step More... almost 2 years ago
Remove use of lowercase hex in SAM aux "H" tag in test data (#694) More... almost 2 years ago
Added CN changes to the VCF 4.4 changelist More... almost 2 years ago
Updated VCF 4.4 PDF to release version More... almost 2 years ago
Promoted VCF 4.4 out of draft status More... almost 2 years ago
Fixed error in PSL example More... almost 2 years ago
Vcf4.4 proofreading (#691) More... almost 2 years ago
Added copy number section with total CN and ASCN examples (#688) More... almost 2 years ago
Fix typos (Crypt4GH) More... about 2 years ago
Fix typos (SAM tags and test data) More... about 2 years ago
Fix typos (CRAM) More... about 2 years ago
#687 removed trailing . from info field descriptions More... about 2 years ago
#687 explicitly stating EVENT/EVENTTYPE can be used for non-symbolic variants. More... about 2 years ago
Updated wording to reflect the conceptual separation of EVENT and variant More... about 2 years ago
Fixed incorrect END and CN in <CNV:TR> example More... about 2 years ago
Fixed typo in VCFv4.3 Spec (#669) More... about 2 years ago