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Analyzed about 1 year ago. based on code collected about 1 year ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Jan 19, 2023 — Jan 19, 2024 Showing page 32 of 33 Search / Filter on:
minor changes in case something goes wrong	Heng Li	More...				over 13 years ago
added a few assertions	Heng Li	More...				over 13 years ago
merge bwt_gen.h to bwt_gen.c	Heng Li	More...				over 13 years ago
first attempt to make bwt_gen work for >4GB seq	Heng Li	More...				over 13 years ago
further code clean up	Heng Li	More...				over 13 years ago
a little bit code clean up	Heng Li	More...				over 13 years ago
update revision number	Heng Li	More...				over 13 years ago
minor change	Heng Li	More...				over 13 years ago
fixed a long existing bug	Heng Li	More...				over 13 years ago
Merge pull request #5 from tobiasmarschall/master	Heng Li	More...				over 13 years ago
Bugfix: reverse (complement) sequence and phred string if alternative alignment has different orientation than primary alignment	Tobias Marschall	More...				over 13 years ago
Merge pull request #2 from RoelKluin/master	Heng Li	More...				over 13 years ago
Remove sequences marked to be filtered by Casava-1.8 with bwa aln -Y	Roel Kluin	More...				over 13 years ago
Revert "In Casava 1.8 the fastq output changed, the name had a space which bwa"	Roel Kluin	More...				over 13 years ago
In Casava 1.8 the fastq output changed, the name had a space which bwa wasn't parsing correctly. This patch fixes that and enables bwa to filter sequences marked by Casava, removing this tag from the output.	RoelKluin	More...				over 13 years ago
convert XA to multiple lines	Heng Li	More...				over 13 years ago
automatically choose the algorithm for BWT	Heng Li	More...				over 13 years ago
increase maximum barcode length limit to 63bp	Heng Li	More...				over 13 years ago
applied patches from Alec Wysoker	Heng Li	More...				almost 14 years ago
added -s to ar	Heng Li	More...				almost 14 years ago
speed up multi-threading	Heng Li	More...				almost 14 years ago
Release bwa-0.5.9 (r16)	Heng Li	More...				about 14 years ago
Added recommendation for PacBio reads	Heng Li	More...				about 14 years ago
fixed a typo in help	Heng Li	More...				about 14 years ago
update the manual page	Heng Li	More...				about 14 years ago
Put BC: to both ends	Heng Li	More...				about 14 years ago
Added barcode support	Heng Li	More...				about 14 years ago
Added an option to accept Illumina 1.3+ fastq	Heng Li	More...				about 14 years ago
fixed a bug in bwase: no RG for unmapped read pairs	Heng Li	More...				about 14 years ago
Updated README	Heng Li	More...				about 14 years ago

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