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Analyzed 12 days ago. based on code collected 13 days ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Jan 29, 2024 — Jan 29, 2025 Showing page 29 of 33 Search / Filter on:
Merge branch 'master' into api	Heng Li	More...				almost 13 years ago
r115: added -I and -S to bwasw	Heng Li	More...				almost 13 years ago
unnecessary large .sai output	Heng Li	More...				almost 13 years ago
updated APIs abit	Heng Li	More...				almost 13 years ago
simplified bwa_se() interface	Heng Li	More...				almost 13 years ago
complete single-end alignment	Heng Li	More...				almost 13 years ago
preliminary doc	Heng Li	More...				almost 13 years ago
compute CIGAR; rev seq not working	Heng Li	More...				almost 13 years ago
towards refined gapped; unfinished	Heng Li	More...				almost 13 years ago
API: aln seems working	Heng Li	More...				almost 13 years ago
commented out debugging code	Heng Li	More...				almost 13 years ago
updated revision number	Heng Li	More...				almost 13 years ago
bugfix: incorrect bandwidth	Heng Li	More...				almost 13 years ago
debugging; bug persistant	Heng Li	More...				almost 13 years ago
debugging code: bwasw has a rare bug	Heng Li	More...				almost 13 years ago
check .64.bwt first and then .bwt	Heng Li	More...				almost 13 years ago
do not use .64 suffix by default	Heng Li	More...				almost 13 years ago
Tim's suggestion suffix file name with .64	Heng Li	More...				almost 13 years ago
bugfix: long-existing out-of-boundary bug	Heng Li	More...				almost 13 years ago
Release bwa-0.6.1	Heng Li	More...				about 13 years ago
bugfix: bwa-sw PE segfault in rare case	Heng Li	More...				about 13 years ago
fastmap: optionally output the original query seq	Heng Li	More...				about 13 years ago
fixed a deadlock; SMEM iterator	Heng Li	More...				about 13 years ago
output the NM tag	Heng Li	More...				about 13 years ago
fixed a minor issue in trimming	Heng Li	More...				about 13 years ago
perhaps improves samse/sampe	Heng Li	More...				about 13 years ago
optionally mark multi-part hits as secondary	Heng Li	More...				about 13 years ago
reordering BWA-SW command-line prompt	Heng Li	More...				about 13 years ago
removed a useless bwa-sw CMD option	Heng Li	More...				about 13 years ago
incorrect mate pos in BWA-SW SE mode	Heng Li	More...				about 13 years ago

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