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Analyzed about 1 year ago. based on code collected over 4 years ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Sep 24, 2019 — Sep 24, 2020 Showing page 402 of 405 Search / Filter on:
Removed unnecessarily included file	Giovanni Bussi	More...				over 13 years ago
Some error check replaced with assert()	Giovanni Bussi	More...				over 13 years ago
Fixes	Giovanni Bussi	More...				over 13 years ago
Moved switching function to a separate object	Giovanni Bussi	More...				over 13 years ago
Temporary fix to allow atom requests to be update in "prepare()"	Giovanni Bussi	More...				over 13 years ago
Cleaning bugs	Max Bonomi	More...				over 13 years ago
added a reference to plumed-code.org	Max Bonomi	More...				over 13 years ago
Fixed a few bugs here and there	Max Bonomi	More...				over 13 years ago
Add a method to Tools to remove duplicates from a STL vector	Max Bonomi	More...				over 13 years ago
Fixed a few things. It is still to be tested.	Max Bonomi	More...				over 13 years ago
Scaling for Angstrom when reading PDB	Giovanni Bussi	More...				over 13 years ago
Renamed some source file	Giovanni Bussi	More...				over 13 years ago
Attempt to decrease dependencies	Giovanni Bussi	More...				over 13 years ago
Implemented ColvarRMSD	Giovanni Bussi	More...				over 13 years ago
Fix in numerical estimate of the virial	Giovanni Bussi	More...				over 13 years ago
Fix (missing const qualifier)	Giovanni Bussi	More...				over 13 years ago
Added prepare() to ColvarCoordination	Giovanni Bussi	More...				over 13 years ago
Added preparation step for Actions	Giovanni Bussi	More...				over 13 years ago
I have put the switchingFunc in Tools and added a comment in Coordination on how to call it. Would it be better to separate parsing tools and Math tools?	Carlo Camilloni	More...				over 13 years ago
Shortcut for parsing groups of atoms	Giovanni Bussi	More...				over 13 years ago
Fix (using AtomNumber now)	Giovanni Bussi	More...				over 13 years ago
Fixed compilation problem with non-MPI compilation	Giovanni Bussi	More...				over 13 years ago
Moved documentation in .h in doxygen format	Max Bonomi	More...				over 13 years ago
Cleaning and preparing ColvarCoordination. I think I only need to get the timestep and pbc and it's ready to be tested	Max Bonomi	More...				over 13 years ago
adding (slowly) the neighbor lists	Max Bonomi	More...				over 13 years ago
some reference & missing	Max Bonomi	More...				over 13 years ago
Arguments in class constructor are passed by const reference. I always make confusion here. It is possible to give default parameter also when having const references.	Max Bonomi	More...				over 13 years ago
using AtomNumber instead of unsigned	Max Bonomi	More...				over 13 years ago
Added initialize() methods to initialize the nl to the full list	Max Bonomi	More...				over 13 years ago
Redesigned NeighborList. Removed indexes_ which contained the list of all the atoms (or something like this) and made more general	Max Bonomi	More...				over 13 years ago

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