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Commits
: Listings
Analyzed
about 1 year
ago. based on code collected
over 4 years
ago.
Aug 25, 2020 — Sep 24, 2020
Showing page 17 of 97
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Fix broken BioSimSpace._SireWrappers.System.getBox().
Lester Hedges
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about 2 years ago
Update minimum Sire version. [ci skip]
Lester Hedges
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about 2 years ago
Update Sire version requirement.
Lester Hedges
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about 2 years ago
Update Exscientia devel to work with Sire 2023 API.
Lester Hedges
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about 2 years ago
Use Sire.Mol.Select to search for disulphides to allow property map.
Lester Hedges
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about 2 years ago
Simplify search used in disulphide test.
Lester Hedges
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about 2 years ago
Add note regarding 2023 atom selection workarounds.
Lester Hedges
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about 2 years ago
Fix distance restraints for single solute.
Lester Hedges
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about 2 years ago
Don't assume solute is MolNum(1).
Lester Hedges
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about 2 years ago
Added basic SOMD FEP test. [ref michellab/Sire#408]
Lester Hedges
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about 2 years ago
Avoid using empty selections when creating to/from dummy groups. [ref #408]
Lester Hedges
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about 2 years ago
Update perturbed residue search following Sire 2023 update.
Lester Hedges
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about 2 years ago
Validate bond parameters in parameterised molecule.
Lester Hedges
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about 2 years ago
Pass through property map to use in connectivity calculation.
Lester Hedges
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about 2 years ago
Use **kwargs to pass through engine-specific keyword arguments. [ref #372]
Lester Hedges
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about 2 years ago
Add support for parameterising with disulphide bridges. [ref #368]
Lester Hedges
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about 2 years ago
Allow user to specify maximum bond distance for bond hunter. [ref michellab/BioSimSpace#368]
Lester Hedges
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about 2 years ago
Detect disulphide bonds and add LEaP bond records. [ref #368]
Lester Hedges
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about 2 years ago
Updating website.
BioSimSpaceBot
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over 2 years ago
Write directly to SDF format where possible to preserve stereochemistry. [closes #389]
Lester Hedges
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over 2 years ago
Synchronise IO sub-package with sandpit. [ci skip]
Lester Hedges
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over 2 years ago
Updating website.
BioSimSpaceBot
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over 2 years ago
Update CHANGELOG for the 2023.0.0 pre-release.
Lester Hedges
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over 2 years ago
Tell user that CMAP records are currently unsupported. [closes #387]
Lester Hedges
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over 2 years ago
Updating website.
BioSimSpaceBot
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over 2 years ago
Pin ipywidgets and use base packages for openff-toolkit/interchange.
Lester Hedges
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over 2 years ago
Pin ipywidgets and use base packages for openff-toolkit/interchange.
Lester Hedges
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over 2 years ago
Depend on openff-toolkit, rather than base package.
Lester Hedges
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over 2 years ago
fix CI to accommodate the changes in alchemlyb (#27)
Zhiyi Wu
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over 2 years ago
Updating website.
BioSimSpaceBot
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over 2 years ago
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