medical image analysis

All the MIA software packages as well as some other image processing related tools and libraries are now made availabe to Gentoo via the imaging overlay. To enable it just run as root layman -a imaging

From the baglog of things that have been done with MIA comes a problication about motion compensation in prostate perfusion imageing.

From the backlog of things that have been done with MIA comes a publication about motion compensation in prostate perfusion imageing.

In order to facilitate coolaboration with people who do not use sourceforge, but github, the master branch of MIA-2 is now mirrored on GitHub. Since this mirroring is done manually expect some delays in the syncronisation.

In order to facilitate coolaboration with people who do not use sourceforge, but github, the master branch of MIA-2 is now mirrored on GitHub. Since this mirroring is done manually expect some delays in the syncronisation.

A new release has been prepared that includes a lot of changes: new programs for doing a fuzzy cmeans classification on sparse input data, combining an abitrary number of images with an comutative operation, estimating a bounding box around the data ... [More] in an image, applying a deformabale model to a mesh, and evaluating statistics in a masked area of an 3d image. New mesh and image filters are provided, amongst them a 2D max-flow/min-cut segmentation filter. The file compression tools that are used transparently can now make use of parallelized implementations like pigz instead of gzip . Important changes for programming with MIA include the replacement of the bounded parameter by the ranged parameter that can also use open and half-open intervals for range definition. Some third party libraries like libxml++, eigen3, and boost/filesystem are no longer visible in the public interface of MIA, which reduces link-time dependencies for third party programs linking against MIA. Finally, in order to achive reproducable builds. time stamps have been removed from the library and user documentation. [Less]

A new release has been prepared that includes a lot of changes: new programs for doing a fuzzy cmeans classification on sparse input data, combining an abitrary number of images with an comutative operation, estimating a bounding box around the data ... [More] in an image, applying a deformabale model to a mesh, and evaluating statistics in a masked area of an 3d image. New mesh and image filters are provided, amongst them a 2D max-flow/min-cut segmentation filter. The file compression tools that are used transparently can now make use of parallelized implementations like pigz instead of gzip . Important changes for programming with MIA include the replacement of the bounded parameter by the ranged parameter that can also use open and half-open intervals for range definition. Some third party libraries like libxml++, eigen3, and boost/filesystem are no longer visible in the public interface of MIA, which reduces link-time dependencies for third party programs linking against MIA. Finally, in order to achive reproducable builds. time stamps have been removed from the library and user documentation. [Less]

The article comparing the cardiac motion compensation algorithms implemented in MIA when applied to the STACOM challenge data is now available from Springer or as preprint.

The article comparing the cardiac motion compensation algorithms implemented in MIA when applied to the STACOM challenge data is now available from Springer or as preprint.

Since Debian is currently in freeze, the Packages for this latest release were uploaded to experimental.