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Commits : Listings

Analyzed 13 days ago. based on code collected 13 days ago.
Jan 28, 2024 — Jan 28, 2025
Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
adding script to extract substrings from FASTA
Rutger Vos
as rvosa
More... about 11 years ago
removing script/genome_chopper.pl
Rutger Vos
as rvosa
More... over 11 years ago
adding script/bamstats.pl script/get_id_for_coordinate.pl
Rutger Vos
as rvosa
More... over 11 years ago
various fixes
Rutger Vos
as rvosa
More... over 11 years ago
adding script to find the ID(s) for a locus in a reference genome
Rutger Vos
as rvosa
More... over 11 years ago
now only operates on a single locus ID, emits both FASTA and quality files
Rutger Vos
as rvosa
More... over 11 years ago
fixed doc bug
Rutger Vos
as rvosa
More... over 11 years ago
removed intermediate BED file creation, made revcom optional, fixed Richard's bug
Rutger Vos
as rvosa
More... over 11 years ago
adding script to split scaffolds into contigs for GenBank submissions
Rutger Vos
as rvosa
More... almost 12 years ago
adding script to generate circos tracks from SAM files
Rutger Vos
as rvosa
More... almost 12 years ago
adding script to extract loci whose coordinates are in GFF3 files from BAM files
Rutger Vos
as rvosa
More... almost 12 years ago
adding simple fastq2fasta script
Rutger Vos
as rvosa
More... almost 12 years ago
added to command line arguments
Rutger Vos
as rvosa
More... almost 12 years ago
adding script to filter duplicated sequences
Rutger Vos
as rvosa
More... almost 12 years ago
removing temp files
Rutger Vos
More... about 12 years ago
adding simple FASTQ splitting script
Rutger Vos
More... about 12 years ago
Initial commit
Rutger Vos
More... about 12 years ago