Central Proteomics Facilities Pipeline

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Analyzed about 1 year ago. based on code collected about 1 year ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Jan 18, 2023 — Jan 18, 2024 Showing page 36 of 37 Search / Filter on:
Move data directory creation and deletion to result classes. Correct cascade deletion for searches to include related meta-searches	dctrud	More...				over 14 years ago
Move explicit deletion cascades to Schema classes and add deletion of PSM/Protein data. NOTE: data dirs not yet removed	dctrud	More...				over 14 years ago
Add CPFP model to web app and switch all DB calls to go via CPFP class. Plain DBIC model (DB) still exists for AutoCRUD only	dctrud	More...				over 14 years ago
Adding ProteinQuants.pm schema file, missed previously	dctrud	More...				over 14 years ago
Adding PSMQuants.pm schema file, missed previously	dctrud	More...				over 14 years ago
Change version number to 1.2.0a	dctrud	More...				over 14 years ago
DB schema / viewer fixes	dctrud	More...				over 14 years ago
Main web app template changes	dctrud	More...				over 14 years ago
DB Quant related changes, plus protein level quantitation display	dctrud	More...				over 14 years ago
Fixing errors due to relationship renames	dctrud	More...				over 14 years ago
Fixing errors due to relationship renames	dctrud	More...				over 14 years ago
Refactoring - class renames and move functionality to Schema::Result classes	dctrud	More...				over 14 years ago
Add option to consider 2 C13 peaks for all search engines	dctrud	More...				over 14 years ago
Viewer changes and TT template renaming	dctrud	More...				over 14 years ago
PepXML import changes (speed-up)	dctrud	More...				over 14 years ago
Add links for DB search results	dctrud	More...				over 14 years ago
Web interface and queuing changes for SGE peaklist processing	dctrud	More...				over 14 years ago
Refactoring - move peaklist processing to perl module	dctrud	More...				over 14 years ago
Refactoring - move peaklist processing to perl module	dctrud	More...				over 14 years ago
Major refactoring of CPFP perl libs, partially complete (OMSSA & meta-search changes)	dctrud	More...				over 14 years ago
Major refactoring of CPFP perl libs, partially complete	dctrud	More...				over 14 years ago
Major refactoring of CPFP perl libs, partially complete	dctrud	More...				over 14 years ago
Merge urgent UploadApplet fixes that were made on live Oxford install	dctrud	More...				over 14 years ago
Add symlink to pipeline_app for Catalyst helper scripts (need dir same as appname)	dctrud	More...				over 14 years ago
Additions for IProphet result parsing & modified peptide string based modification parsing	dctrud	More...				over 14 years ago
Fix typo in cpan_modules.sh module install script	dctrud	More...				over 14 years ago
Updated Catalyst scripts, name changed due to appname to CPFPWeb	dctrud	More...				over 14 years ago
Live Fix: signed jar build of updated UploadApplet	dctrud	More...				over 14 years ago
Live Fix: UploadApplet retries failed uploads and has fixed error handling (don't redirect after error)	dctrud	More...				over 14 years ago
Initial protxml and pepxml import to DB work	David Trudgian	More...				over 14 years ago

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