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Commits : Listings

Analyzed 12 months ago. based on code collected 12 months ago.
Jan 18, 2023 — Jan 18, 2024
Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
Doc maintained. More... about 13 years ago
Updated data files and filenames in tests. More... about 13 years ago
Updated doctests to reflect the change in parsePDB atom naming. More... about 13 years ago
Incremented version number. More... about 13 years ago
Changed how parsePDB sets atom group name. More... about 13 years ago
Changed example to make it run faster by parsing only chain of interest. More... about 13 years ago
Revert "Modified the handling of the PDB mirror path." More... about 13 years ago
Doc fixes. More... about 13 years ago
Changed PDBBlastRecord.getHits function to accept chain boolean argument and return individual chains as hits when it is set True. More... about 13 years ago
Updated scanPerturbationResponse method. More... about 13 years ago
Doc fix. More... about 13 years ago
Modified the handling of the PDB mirror path. More... about 13 years ago
Renamed ProDyProgress.clean() method as clear. More... about 13 years ago
Changed scanPerturbationResponse function to accept AtomGroup instance and set response profiles as atomic attributes. More... about 13 years ago
Updated pca_blast example. More... about 13 years ago
Fixed grammar in log text. More... about 13 years ago
Changed getAtomNameRegex function to return the pattern not the compiled regex. More... about 13 years ago
Doc update. More... about 13 years ago
Doc updated. More... about 13 years ago
Changed handling of PDB file paths to ensure tests run OK from different folders. More... about 13 years ago
Documentation updated. More... about 13 years ago
Added new selection tests. More... about 13 years ago
Doc fix. More... about 13 years ago
Added selection macro tests. More... about 13 years ago
Added tests for checing set/getBackboneAtomNames functions and fixed a bug in buildKeywordMaps function. More... about 13 years ago
Changed the outcome of a test in response to changes in keyword definitions. More... about 13 years ago
Improved type checks in set/get keyword definition functions. More... about 13 years ago
Changed backbone keyword definition to exclude hydrogen atoms. backbonefull selects n-term hydrogens, bb hydrogens, and c-terminal oxygens when available. sidechain definition is also based on backbonefull definition. More... about 13 years ago
Fixed documentation. More... about 13 years ago
Renamed a module variable. More... about 13 years ago