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Commits : Listings

Analyzed 12 months ago. based on code collected 12 months ago.
Jan 16, 2023 — Jan 16, 2024
Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
Bump version number, update changelog More... almost 3 years ago
Remove ancient TRAVIS CI checks from build scripts (#1757) More... almost 3 years ago
Fix recent cmake-based build issues due to changed sundials library directory (#1756) More... almost 3 years ago
Fix get_model_settings for initial states + sensitivities (#1751) More... almost 3 years ago
CI: Skip Python-only tests under valgrind (#1752) More... almost 3 years ago
Speedup conservation law computation (#1754) More... almost 3 years ago
SBML import: Alternative algorithm for identifying conservation laws (#1748) More... almost 3 years ago
CI: Upgrade from deprecated codecov/codecov...@v1 to v2 (#1749) More... almost 3 years ago
CI: performance test, increase time for adjoint simulation to 2.5s More... almost 3 years ago
speedup edata construction from petab problems (#1746) More... almost 3 years ago
use pass by reference, add consts where possible (steadystateproblem) (#1745) More... almost 3 years ago
Add `ReturnData::cpu_time_total` to track total time spent in runAmiciS… (#1743) More... almost 3 years ago
Remove legacy options/members `amioption.newton_preeq` and `Solver::r… (#1744) More... almost 3 years ago
Model import: parallelize computation of derivatives (#1740) More... almost 3 years ago
add newton step convergence checks to steadystate solver (#1737) More... almost 3 years ago
Fix HDF5 OSX intermediate group creation errors (#1741) More... almost 3 years ago
fix doc: pin jinja2 version, incompatible with current nbsphinx (#1742) More... almost 3 years ago
Fix undefined reference to dladdr (#1738) More... almost 3 years ago
Cleanup steadystate (#1732) More... almost 3 years ago
Fix Model::setStateIsNonNegative (#1736) More... almost 3 years ago
Check condition number when computing sensitivities via newton (#1730) More... almost 3 years ago
Make sundials' KLU_INDEXTYPE match actual klu index type (#1733) More... almost 3 years ago
Doc: Fix sphinx-hoverxref master->main (#1735) More... almost 3 years ago
harmonize convergence checks (#1731) More... almost 3 years ago
remove SPBCG solver (#1729) More... almost 3 years ago
use correct tolerances for convergence check in newton solver (#1728) More... almost 3 years ago
Release 0.11.26 More... almost 3 years ago
CI: Skip some long running tests under valgrind (#1725) More... almost 3 years ago
Refactor setup.py clibs - add basedir argument (#1724) More... almost 3 years ago
CI: Fix osx build (pin hdf5, boost dirs, omp dir) (#1723) More... almost 3 years ago